HL_9I14_058

3D structure

PDB id

9I14 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES IN HYBRID-PRE STATE

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

U(PSU)UGGGUUUUA

Length

11 nucleotides

Bulged bases

9I14|1|L5|U|4354

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I14|1|L5|U|4352
9I14|1|L5|PSU|4353
9I14|1|L5|U|4354
9I14|1|L5|G|4355
9I14|1|L5|G|4356
9I14|1|L5|G|4357
9I14|1|L5|U|4358
9I14|1|L5|U|4359
9I14|1|L5|U|4360
9I14|1|L5|U|4361
9I14|1|L5|A|4362

Current chains

Chain L5

LSU 28S rRNA

Nearby chains

Chain LL

60S ribosomal protein L13

Chain La

60S ribosomal protein L27a

Chain Li

60S ribosomal protein L36

Chain Lo

60S ribosomal protein L36a