HL_9I1W_021

3D structure

PDB id

9I1W (explore in PDB, NAKB, or RNA 3D Hub)

Description

High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

(A2M)CGUGCAAAU

Length

10 nucleotides

Bulged bases

9I1W|1|1|U|861, 9I1W|1|1|A|865, 9I1W|1|1|A|866

QA status

Modified nucleotides: A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I1W|1|1|A2M|858
9I1W|1|1|C|859
9I1W|1|1|G|860
9I1W|1|1|U|861
9I1W|1|1|G|862
9I1W|1|1|C|863
9I1W|1|1|A|864
9I1W|1|1|A|865
9I1W|1|1|A|866
9I1W|1|1|U|867

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LB

60S ribosomal protein L3-like protein

Chain LP

60S ribosomal protein l17-like protein

Chain Lj

Ribosomal protein L37