HL_9I1W_022

3D structure

PDB id

9I1W (explore in PDB, NAKB, or RNA 3D Hub)

Description

High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

GCGAAAG(A2M)C

Length

9 nucleotides

Bulged bases

9I1W|1|1|A|895, 9I1W|1|1|G|898

QA status

Modified nucleotides: A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I1W|1|1|G|892
9I1W|1|1|C|893
9I1W|1|1|G|894
9I1W|1|1|A|895
9I1W|1|1|A|896
9I1W|1|1|A|897
9I1W|1|1|G|898
9I1W|1|1|A2M|899
9I1W|1|1|C|900

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LA

60S ribosomal protein L2-like protein

Chain LN

Ribosomal protein L15

Chain Lj

Ribosomal protein L37