HL_9I1W_028

3D structure

PDB id

9I1W (explore in PDB, NAKB, or RNA 3D Hub)

Description

High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

C(A2M)UGGAAGUCG

Length

11 nucleotides

Bulged bases

9I1W|1|1|U|1224, 9I1W|1|1|A|1228

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I1W|1|1|C|1222
9I1W|1|1|A2M|1223
9I1W|1|1|U|1224
9I1W|1|1|G|1225
9I1W|1|1|G|1226
9I1W|1|1|A|1227
9I1W|1|1|A|1228
9I1W|1|1|G|1229
9I1W|1|1|U|1230
9I1W|1|1|C|1231
9I1W|1|1|G|1232

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LK

60S ribosomal protein L12-like protein