HL_9I1W_048

3D structure

PDB id

9I1W (explore in PDB, NAKB, or RNA 3D Hub)

Description

High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

G(PSU)A(A2M)C(PSU)A(PSU)GAC

Length

11 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I1W|1|1|G|2216
9I1W|1|1|PSU|2217
9I1W|1|1|A|2218
9I1W|1|1|A2M|2219
9I1W|1|1|C|2220
9I1W|1|1|PSU|2221
9I1W|1|1|A|2222
9I1W|1|1|PSU|2223
9I1W|1|1|G|2224
9I1W|1|1|A|2225
9I1W|1|1|C|2226

Current chains

Chain 1

26S rRNA

Nearby chains