HL_9I1W_066

3D structure

PDB id

9I1W (explore in PDB, NAKB, or RNA 3D Hub)

Description

High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

CUGAACGCCUCUAAG

Length

15 nucleotides

Bulged bases

9I1W|1|1|G|3074, 9I1W|1|1|C|3078

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I1W|1|1|C|3068
9I1W|1|1|U|3069
9I1W|1|1|G|3070
9I1W|1|1|A|3071
9I1W|1|1|A|3072
9I1W|1|1|C|3073
9I1W|1|1|G|3074
9I1W|1|1|C|3075
9I1W|1|1|C|3076
9I1W|1|1|U|3077
9I1W|1|1|C|3078
9I1W|1|1|U|3079
9I1W|1|1|A|3080
9I1W|1|1|A|3081
9I1W|1|1|G|3082

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LH

60S ribosomal protein l9-like protein

Chain LO

60S ribosomal protein L16-like protein

Chain Lm

Putative ribosomal protein