HL_9I1W_075
3D structure
- PDB id
- 9I1W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- GUGAA(PSU)U(OMG)CAGAAUUCCGUGAAUC
- Length
- 24 nucleotides
- Bulged bases
- 9I1W|1|4|C|84, 9I1W|1|4|U|86, 9I1W|1|4|U|90
- QA status
- Modified nucleotides: PSU, OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9I1W|1|4|G|68
9I1W|1|4|U|69
9I1W|1|4|G|70
9I1W|1|4|A|71
9I1W|1|4|A|72
9I1W|1|4|PSU|73
9I1W|1|4|U|74
9I1W|1|4|OMG|75
9I1W|1|4|C|76
9I1W|1|4|A|77
9I1W|1|4|G|78
9I1W|1|4|A|79
9I1W|1|4|A|80
9I1W|1|4|U|81
9I1W|1|4|U|82
9I1W|1|4|C|83
9I1W|1|4|C|84
9I1W|1|4|G|85
9I1W|1|4|U|86
9I1W|1|4|G|87
9I1W|1|4|A|88
9I1W|1|4|A|89
9I1W|1|4|U|90
9I1W|1|4|C|91
Current chains
- Chain 4
- 5.8S RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain LY
- 60S ribosomal protein L26-like protein
- Chain Lh
- Dolichyl-diphosphooligosaccharide--protein glycotransferase
- Chain Lj
- Ribosomal protein L37
- Chain Ll
- Ribosomal protein eL39
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