HL_9I2D_029

3D structure

PDB id

9I2D (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 10 amino acid ARF1-linker

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

CAUGGAAGUCG

Length

11 nucleotides

Bulged bases

9I2D|1|L5|A|1984

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I2D|1|L5|C|1978
9I2D|1|L5|A|1979
9I2D|1|L5|U|1980
9I2D|1|L5|G|1981
9I2D|1|L5|G|1982
9I2D|1|L5|A|1983
9I2D|1|L5|A|1984
9I2D|1|L5|G|1985
9I2D|1|L5|U|1986
9I2D|1|L5|C|1987
9I2D|1|L5|G|1988

Current chains

Chain L5

28S rRNA

Nearby chains

Chain CR

Eukaryotic peptide chain release factor subunit 1

Chain LI

Ribosomal protein uL16-like

Chain Lt

Large ribosomal subunit protein uL11