HL_9I2D_097

3D structure

PDB id

9I2D (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 10 amino acid ARF1-linker

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

AGGUGAAAUU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I2D|1|S2|A|957
9I2D|1|S2|G|958
9I2D|1|S2|G|959
9I2D|1|S2|U|960
9I2D|1|S2|G|961
9I2D|1|S2|A|962
9I2D|1|S2|A|963
9I2D|1|S2|A|964
9I2D|1|S2|U|965
9I2D|1|S2|U|966

Current chains

Chain S2

18S rRNA

Nearby chains

Chain CM

CMV-staller mRNA with 18aa ARF1-linker

Chain SF

40S ribosomal protein S5

Chain SO

40S ribosomal protein S14