HL_9I2D_103

3D structure

PDB id

9I2D (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 10 amino acid ARF1-linker

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

GACUCAACAC

Length

10 nucleotides

Bulged bases

9I2D|1|S2|A|1253

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I2D|1|S2|G|1245
9I2D|1|S2|A|1246
9I2D|1|S2|C|1247
9I2D|1|S2|U|1248
9I2D|1|S2|C|1249
9I2D|1|S2|A|1250
9I2D|1|S2|A|1251
9I2D|1|S2|C|1252
9I2D|1|S2|A|1253
9I2D|1|S2|C|1254

Current chains

Chain S2

18S rRNA

Nearby chains

Chain CP

Transfer RNA; tRNA

Chain CR

Eukaryotic peptide chain release factor subunit 1

Chain SQ

40S ribosomal protein S16

Chain SU

40S ribosomal protein S20

Chain Sd

40S ribosomal protein S29