HL_9I2D_111

3D structure

PDB id

9I2D (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 10 amino acid ARF1-linker

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

GUCAUAAGC

Length

9 nucleotides

Bulged bases

9I2D|1|S2|C|1660, 9I2D|1|S2|G|1665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I2D|1|S2|G|1658
9I2D|1|S2|U|1659
9I2D|1|S2|C|1660
9I2D|1|S2|A|1661
9I2D|1|S2|U|1662
9I2D|1|S2|A|1663
9I2D|1|S2|A|1664
9I2D|1|S2|G|1665
9I2D|1|S2|C|1666

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SQ

40S ribosomal protein S16

Chain SS

40S ribosomal protein S18

Chain ST

40S ribosomal protein S19

Chain SU

40S ribosomal protein S20

Chain Sd

40S ribosomal protein S29