HL_9I3L_009

3D structure

PDB id

9I3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome with filamin mutant Y719E nascent chain at linker length of 47 amino acids, with tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUUCGA

Length

6 nucleotides

Bulged bases

9I3L|1|b|U|139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9I3L_009 not in the Motif Atlas

Geometric match to HL_6QN3_001

Geometric discrepancy: 0.0786

The information below is about HL_6QN3_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

9I3L|1|b|U|137
9I3L|1|b|U|138
9I3L|1|b|U|139
9I3L|1|b|C|140
9I3L|1|b|G|141
9I3L|1|b|A|142

Current chains

Chain b

23S rRNA

Nearby chains

Chain t

Large ribosomal subunit protein uL23