HL_9I3L_031

3D structure

PDB id

9I3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome with filamin mutant Y719E nascent chain at linker length of 47 amino acids, with tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAAACAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9I3L_031 not in the Motif Atlas

Homologous match to HL_7A0S_027

Geometric discrepancy: 0.2235

The information below is about HL_7A0S_027

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47171.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

9I3L|1|b|G|980
9I3L|1|b|A|981
9I3L|1|b|A|982
9I3L|1|b|A|983
9I3L|1|b|C|984
9I3L|1|b|A|985
9I3L|1|b|A|986
9I3L|1|b|C|987

Current chains

Chain b

23S rRNA

Nearby chains

Chain q

Large ribosomal subunit protein bL20

Chain r

Large ribosomal subunit protein bL21