HL_9I3L_041

3D structure

PDB id

9I3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome with filamin mutant Y719E nascent chain at linker length of 47 amino acids, with tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCAAAUC

Length

7 nucleotides

Bulged bases

9I3L|1|b|C|1495, 9I3L|1|b|U|1499

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9I3L_041 not in the Motif Atlas

Homologous match to HL_7A0S_037

Geometric discrepancy: 0.4792

The information below is about HL_7A0S_037

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_39243.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

2

Unit IDs

9I3L|1|b|G|1494
9I3L|1|b|C|1495
9I3L|1|b|A|1496
9I3L|1|b|A|1497
9I3L|1|b|A|1498
9I3L|1|b|U|1499
9I3L|1|b|C|1500

Current chains

Chain b

23S rRNA

Nearby chains

Chain c

Large ribosomal subunit protein uL2