HL_9I3L_045

3D structure

PDB id

9I3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome with filamin mutant Y719E nascent chain at linker length of 47 amino acids, with tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AGAGAAU

Length

7 nucleotides

Bulged bases

9I3L|1|b|A|1636

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9I3L_045 not in the Motif Atlas

Geometric match to HL_8B0X_069

Geometric discrepancy: 0.0571

The information below is about HL_8B0X_069

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

9I3L|1|b|A|1632
9I3L|1|b|G|1633
9I3L|1|b|A|1634
9I3L|1|b|G|1635
9I3L|1|b|A|1636
9I3L|1|b|A|1637
9I3L|1|b|U|1638

Current chains

Chain b

23S rRNA

Nearby chains