HL_9I3L_054

3D structure

PDB id

9I3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome with filamin mutant Y719E nascent chain at linker length of 47 amino acids, with tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUGGGAGGCUUAGAAGUGUGGACGCCAGUCUGCAUGGAGCCGACCUUGAAAUACCAC

Length

57 nucleotides

Bulged bases

9I3L|1|b|G|2127, 9I3L|1|b|G|2128, 9I3L|1|b|U|2134, 9I3L|1|b|U|2135, 9I3L|1|b|A|2136, 9I3L|1|b|G|2137, 9I3L|1|b|G|2148, 9I3L|1|b|A|2151, 9I3L|1|b|U|2153, 9I3L|1|b|G|2161, 9I3L|1|b|A|2162, 9I3L|1|b|G|2166, 9I3L|1|b|C|2168, 9I3L|1|b|A|2173, 9I3L|1|b|U|2176, 9I3L|1|b|C|2178

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I3L|1|b|G|2125
9I3L|1|b|U|2126
9I3L|1|b|G|2127
9I3L|1|b|G|2128
9I3L|1|b|G|2129
9I3L|1|b|A|2130
9I3L|1|b|G|2131
9I3L|1|b|G|2132
9I3L|1|b|C|2133
9I3L|1|b|U|2134
9I3L|1|b|U|2135
9I3L|1|b|A|2136
9I3L|1|b|G|2137
9I3L|1|b|A|2138
9I3L|1|b|A|2139
9I3L|1|b|G|2140
9I3L|1|b|U|2141
9I3L|1|b|G|2142
9I3L|1|b|U|2143
9I3L|1|b|G|2144
9I3L|1|b|G|2145
9I3L|1|b|A|2146
9I3L|1|b|C|2147
9I3L|1|b|G|2148
9I3L|1|b|C|2149
9I3L|1|b|C|2150
9I3L|1|b|A|2151
9I3L|1|b|G|2152
9I3L|1|b|U|2153
9I3L|1|b|C|2154
9I3L|1|b|U|2155
9I3L|1|b|G|2156
9I3L|1|b|C|2157
9I3L|1|b|A|2158
9I3L|1|b|U|2159
9I3L|1|b|G|2160
9I3L|1|b|G|2161
9I3L|1|b|A|2162
9I3L|1|b|G|2163
9I3L|1|b|C|2164
9I3L|1|b|C|2165
9I3L|1|b|G|2166
9I3L|1|b|A|2167
9I3L|1|b|C|2168
9I3L|1|b|C|2169
9I3L|1|b|U|2170
9I3L|1|b|U|2171
9I3L|1|b|G|2172
9I3L|1|b|A|2173
9I3L|1|b|A|2174
9I3L|1|b|A|2175
9I3L|1|b|U|2176
9I3L|1|b|A|2177
9I3L|1|b|C|2178
9I3L|1|b|C|2179
9I3L|1|b|A|2180
9I3L|1|b|C|2181

Current chains

Chain b

23S rRNA

Nearby chains