HL_9I3L_070

3D structure

PDB id

9I3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome with filamin mutant Y719E nascent chain at linker length of 47 amino acids, with tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUUUAAG

Length

7 nucleotides

Bulged bases

9I3L|1|b|U|2801, 9I3L|1|b|A|2803

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9I3L_070 not in the Motif Atlas

Geometric match to HL_8OI5_017

Geometric discrepancy: 0.3626

The information below is about HL_8OI5_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_44506.3

Basepair signature

cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

9I3L|1|b|C|2799
9I3L|1|b|U|2800
9I3L|1|b|U|2801
9I3L|1|b|U|2802
9I3L|1|b|A|2803
9I3L|1|b|A|2804
9I3L|1|b|G|2805

Current chains

Chain b

23S rRNA

Nearby chains