HL_9I5T_020

3D structure

PDB id

9I5T (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit of P. gingivalis ribosome with Lefamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GGGCGAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I5T|1|A|G|1250
9I5T|1|A|G|1251
9I5T|1|A|G|1252
9I5T|1|A|C|1253
9I5T|1|A|G|1254
9I5T|1|A|A|1255
9I5T|1|A|C|1256

Current chains

Chain A

23S rRNA

Nearby chains

Chain O

Large ribosomal subunit protein uL15

Chain T

Large ribosomal subunit protein bL20

Chain U

Large ribosomal subunit protein bL21