HL_9I5V_051

3D structure

PDB id

9I5V (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S P. gingivalis ribosome erm-delta-porN strain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UACUGAGACACGGA

Length

14 nucleotides

Bulged bases

9I5V|1|a|C|333, 9I5V|1|a|C|335, 9I5V|1|a|G|336

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I5V|1|a|U|325
9I5V|1|a|A|326
9I5V|1|a|C|327
9I5V|1|a|U|328
9I5V|1|a|G|329
9I5V|1|a|A|330
9I5V|1|a|G|331
9I5V|1|a|A|332
9I5V|1|a|C|333
9I5V|1|a|A|334
9I5V|1|a|C|335
9I5V|1|a|G|336
9I5V|1|a|G|337
9I5V|1|a|A|338

Current chains

Chain a

16S rRNA

Nearby chains

Chain c

Small ribosomal subunit protein bS16

Chain d

Small ribosomal subunit protein bS20