HL_9I78_028

3D structure

PDB id

9I78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GACUGUGUAACAACUC

Length

16 nucleotides

Bulged bases

9I78|1|L1|A|1246, 9I78|1|L1|A|1253

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I78|1|L1|G|1245
9I78|1|L1|A|1246
9I78|1|L1|C|1247
9I78|1|L1|U|1248
9I78|1|L1|G|1249
9I78|1|L1|U|1250
9I78|1|L1|G|1251
9I78|1|L1|U|1252
9I78|1|L1|A|1253
9I78|1|L1|A|1254
9I78|1|L1|C|1255
9I78|1|L1|A|1256
9I78|1|L1|A|1257
9I78|1|L1|C|1258
9I78|1|L1|U|1259
9I78|1|L1|C|1260

Current chains

Chain L1

26S rRNA

Nearby chains