HL_9J1M_067

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

ACUUGGU

Length

7 nucleotides

Bulged bases

9J1M|1|A|U|3034, 9J1M|1|A|G|3037

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9J1M_067 not in the Motif Atlas

Geometric match to HL_6VMY_004

Geometric discrepancy: 0.2526

The information below is about HL_6VMY_004

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

9J1M|1|A|A|3032
9J1M|1|A|C|3033
9J1M|1|A|U|3034
9J1M|1|A|U|3035
9J1M|1|A|G|3036
9J1M|1|A|G|3037
9J1M|1|A|U|3038

Current chains

Chain A

23S rRNA

Nearby chains