HL_9J1M_077

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CGCUUUAG

Length

8 nucleotides

Bulged bases

9J1M|1|a|U|213, 9J1M|1|a|U|214, 9J1M|1|a|U|215, 9J1M|1|a|A|216

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9J1M_077 not in the Motif Atlas

Geometric match to HL_2Y9H_004

Geometric discrepancy: 0.3135

The information below is about HL_2Y9H_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_97696.1

Basepair signature

cWW-F-F

Number of instances in this motif group

6

Unit IDs

9J1M|1|a|C|210
9J1M|1|a|G|211
9J1M|1|a|C|212
9J1M|1|a|U|213
9J1M|1|a|U|214
9J1M|1|a|U|215
9J1M|1|a|A|216
9J1M|1|a|G|217

Current chains

Chain a

16S rRNA

Nearby chains