HL_9JMK_012

3D structure

PDB id

9JMK (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Ribosomal Subunit precursor state III

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GACACGUGGUAUC

Length

13 nucleotides

Bulged bases

9JMK|1|A|G|386, 9JMK|1|A|G|389

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JMK|1|A|G|381
9JMK|1|A|A|382
9JMK|1|A|C|383
9JMK|1|A|A|384
9JMK|1|A|C|385
9JMK|1|A|G|386
9JMK|1|A|U|387
9JMK|1|A|G|388
9JMK|1|A|G|389
9JMK|1|A|U|390
9JMK|1|A|A|391
9JMK|1|A|U|392
9JMK|1|A|C|393

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain X

50S ribosomal protein L28