3D structure

PDB id
9JMK (explore in PDB, NAKB, or RNA 3D Hub)
Description
50S Ribosomal Subunit precursor state III
Experimental method
ELECTRON MICROSCOPY
Resolution
4 Å

Loop

Sequence
UUUAUUAAAAA
Length
11 nucleotides
Bulged bases
9JMK|1|A|U|1782, 9JMK|1|A|A|1786
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9JMK|1|A|U|1777
9JMK|1|A|U|1778
9JMK|1|A|U|1779
9JMK|1|A|A|1780
9JMK|1|A|U|1781
9JMK|1|A|U|1782
9JMK|1|A|A|1783
9JMK|1|A|A|1784
9JMK|1|A|A|1785
9JMK|1|A|A|1786
9JMK|1|A|A|1787

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 2
50S ribosomal protein L34
Chain C
50S ribosomal protein L2

Coloring options:

Copyright 2026 BGSU RNA group. Page generated in 0.1013 s