3D structure

PDB id
9JMK (explore in PDB, NAKB, or RNA 3D Hub)
Description
50S Ribosomal Subunit precursor state III
Experimental method
ELECTRON MICROSCOPY
Resolution
4 Å

Loop

Sequence
GUCGGACAU
Length
9 nucleotides
Bulged bases
9JMK|1|A|U|2305, 9JMK|1|A|A|2311
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9JMK|1|A|G|2304
9JMK|1|A|U|2305
9JMK|1|A|C|2306
9JMK|1|A|G|2307
9JMK|1|A|G|2308
9JMK|1|A|A|2309
9JMK|1|A|C|2310
9JMK|1|A|A|2311
9JMK|1|A|U|2312

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain F
50S ribosomal protein L5

Coloring options:

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