HL_9JNS_010
3D structure
- PDB id
- 9JNS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S precursor - Erm complex (C-II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GUGACAGCC
- Length
- 9 nucleotides
- Bulged bases
- 9JNS|1|A|G|329, 9JNS|1|A|A|330, 9JNS|1|A|C|331
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9JNS_010 not in the Motif Atlas
- Homologous match to HL_7A0S_012
- Geometric discrepancy: 0.4173
- The information below is about HL_7A0S_012
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_27670.4
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 16
Unit IDs
9JNS|1|A|G|327
9JNS|1|A|U|328
9JNS|1|A|G|329
9JNS|1|A|A|330
9JNS|1|A|C|331
9JNS|1|A|A|332
9JNS|1|A|G|333
9JNS|1|A|C|334
9JNS|1|A|C|335
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain U
- 50S ribosomal protein L24
Coloring options: