HL_9JPP_039

3D structure

PDB id

9JPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Lys(mcm5s2U34) and mRNA(AAG)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.26 Å

Loop

Sequence

UGAAUCCAUAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JPP|1|a|U|158
9JPP|1|a|G|159
9JPP|1|a|A|160
9JPP|1|a|A|161
9JPP|1|a|U|162
9JPP|1|a|C|163
9JPP|1|a|C|164
9JPP|1|a|A|165
9JPP|1|a|U|166
9JPP|1|a|A|167
9JPP|1|a|G|168

Current chains

Chain a

23S rRNA

Nearby chains

Chain w

50S ribosomal protein L28