HL_9JSR_008

3D structure

PDB id

9JSR (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S precursor - Erm complex (C-I)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9JSR_008 not in the Motif Atlas

Homologous match to HL_7A0S_008

Geometric discrepancy: 0.3585

The information below is about HL_7A0S_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_76371.2

Basepair signature

cWW-tSH-F-F-F

Number of instances in this motif group

14

Unit IDs

9JSR|1|A|C|246
9JSR|1|A|G|247
9JSR|1|A|G|248
9JSR|1|A|C|249
9JSR|1|A|G|250
9JSR|1|A|A|251
9JSR|1|A|G|252

Current chains

Chain A

23S Ribosomal RNA

Nearby chains