HL_9K0Z_020
3D structure
- PDB id
- 9K0Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EF-G2 bound 70S ribosome complex of M. smegmatis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 9K0Z|1|A|U|773
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9K0Z_020 not in the Motif Atlas
- Geometric match to HL_4LFB_017
- Geometric discrepancy: 0.1188
- The information below is about HL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.3
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
9K0Z|1|A|G|766
9K0Z|1|A|A|767
9K0Z|1|A|U|768
9K0Z|1|A|U|769
9K0Z|1|A|A|770
9K0Z|1|A|G|771
9K0Z|1|A|A|772
9K0Z|1|A|U|773
9K0Z|1|A|A|774
9K0Z|1|A|C|775
9K0Z|1|A|C|776
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain 2
- Transfer RNA; tRNA
- Chain 4
- mRNA fragment
- Chain K
- Small ribosomal subunit protein uS11
- Chain h
- Large subunit ribosomal RNA; LSU rRNA
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