HL_9K0Z_036
3D structure
- PDB id
- 9K0Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EF-G2 bound 70S ribosome complex of M. smegmatis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CAUCCCG
- Length
- 7 nucleotides
- Bulged bases
- 9K0Z|1|B|C|42
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9K0Z_036 not in the Motif Atlas
- Geometric match to HL_1MJI_002
- Geometric discrepancy: 0.1395
- The information below is about HL_1MJI_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_59381.3
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
9K0Z|1|B|C|39
9K0Z|1|B|A|40
9K0Z|1|B|U|41
9K0Z|1|B|C|42
9K0Z|1|B|C|43
9K0Z|1|B|C|44
9K0Z|1|B|G|45
Current chains
- Chain B
- 5S ribosomal RNA
Nearby chains
- Chain g
- Large ribosomal subunit protein bL31
- Chain h
- Large subunit ribosomal RNA; LSU rRNA
- Chain l
- Large ribosomal subunit protein uL5
- Chain v
- Large ribosomal subunit protein uL18
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