HL_9K10_074
3D structure
- PDB id
- 9K10 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EF-G2 bound 50S ribosome subunit complex of M. smegmatis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CAUCCG
- Length
- 6 nucleotides
- Bulged bases
- 9K10|1|B|U|87, 9K10|1|B|C|88
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9K10_074 not in the Motif Atlas
- Geometric match to HL_5HR7_005
- Geometric discrepancy: 0.2534
- The information below is about HL_5HR7_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50006.4
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 5
Unit IDs
9K10|1|B|C|85
9K10|1|B|A|86
9K10|1|B|U|87
9K10|1|B|C|88
9K10|1|B|C|89
9K10|1|B|G|90
Current chains
- Chain B
- 5S ribosomal RNA
Nearby chains
- Chain 3
- 50S ribosomal protein bL37
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain W
- 50S ribosomal protein L25
- Chain a
- 50S ribosomal protein L30
Coloring options: