HL_9K30_002

3D structure

PDB id

9K30 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the TbaIscB-omega RNA-target DNA complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

UGUUCGAUCCAG

Length

12 nucleotides

Bulged bases

9K30|1|B|C|240

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K30|1|B|U|236
9K30|1|B|G|237
9K30|1|B|U|238
9K30|1|B|U|239
9K30|1|B|C|240
9K30|1|B|G|241
9K30|1|B|A|242
9K30|1|B|U|243
9K30|1|B|C|244
9K30|1|B|C|245
9K30|1|B|A|246
9K30|1|B|G|247

Current chains

Chain B

Omega RNA

Nearby chains

Chain A

TbaIscB