HL_9KDV_034

3D structure

PDB id

9KDV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.33 Å

Loop

Sequence

GUUCGCC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9KDV|1|L5|G|2418
9KDV|1|L5|U|2419
9KDV|1|L5|U|2420
9KDV|1|L5|C|2421
9KDV|1|L5|G|2422
9KDV|1|L5|C|2423
9KDV|1|L5|C|2424

Current chains

Chain L5

Mus musculus 28S ribosomal RNA

Nearby chains

Chain LR

Large ribosomal subunit protein eL19

Chain Lp

Large ribosomal subunit protein eL43