HL_9KDV_068

3D structure

PDB id

9KDV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.33 Å

Loop

Sequence

GUUCCUC

Length

7 nucleotides

Bulged bases

9KDV|1|L8|C|125, 9KDV|1|L8|C|126

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9KDV|1|L8|G|122
9KDV|1|L8|U|123
9KDV|1|L8|U|124
9KDV|1|L8|C|125
9KDV|1|L8|C|126
9KDV|1|L8|U|127
9KDV|1|L8|C|128

Current chains

Chain L8

Mus musculus 5.8S ribosomal RNA

Nearby chains

Chain L5

Large subunit ribosomal RNA; LSU rRNA