HL_9KN6_017
3D structure
- PDB id
- 9KN6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HCV IRES-dependent pre-48S translation initiation complex with eIF1A, eIF5B, and eIF3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UAUUUUGUUGGUUUUCG
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9KN6|1|S2|U|885
9KN6|1|S2|A|886
9KN6|1|S2|U|887
9KN6|1|S2|U|888
9KN6|1|S2|U|889
9KN6|1|S2|U|890
9KN6|1|S2|G|891
9KN6|1|S2|U|892
9KN6|1|S2|U|893
9KN6|1|S2|G|894
9KN6|1|S2|G|895
9KN6|1|S2|U|896
9KN6|1|S2|U|897
9KN6|1|S2|U|898
9KN6|1|S2|U|899
9KN6|1|S2|C|900
9KN6|1|S2|G|901
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SG
- 40S ribosomal protein S6
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