HL_9L0R_066
3D structure
- PDB id
- 9L0R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Streptococcus agalactiae GOLLD RNA dodecamer
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.72 Å
Loop
- Sequence
- AGGGAU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9L0R_066 not in the Motif Atlas
- Geometric match to HL_5M0J_002
- Geometric discrepancy: 0.2611
- The information below is about HL_5M0J_002
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.6
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 434
Unit IDs
9L0R|1|D|A|628
9L0R|1|D|G|629
9L0R|1|D|G|630
9L0R|1|D|G|631
9L0R|1|D|A|632
9L0R|1|D|U|633
Current chains
- Chain D
- RNA (700-MER)
Nearby chains
- Chain J
- Giant, ornate, lake- and Lactobacillales-derived (GOLLD) RNA
Coloring options: