HL_9MEE_260
3D structure
- PDB id
- 9MEE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- GOLLD RNA nanocage (env-38)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AACUAAUCCCU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9MEE_260 not in the Motif Atlas
- Geometric match to HL_4UYK_001
- Geometric discrepancy: 0.3393
- The information below is about HL_4UYK_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_14063.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
9MEE|1|M|A|248
9MEE|1|M|A|249
9MEE|1|M|C|250
9MEE|1|M|U|251
9MEE|1|M|A|252
9MEE|1|M|A|253
9MEE|1|M|U|254
9MEE|1|M|C|255
9MEE|1|M|C|256
9MEE|1|M|C|257
9MEE|1|M|U|258
Current chains
- Chain M
- GOLLD RNA nanocage
Nearby chains
- Chain L
- Giant, ornate, lake- and Lactobacillales-derived (GOLLD) RNA
Coloring options: