HL_9MKK_063

3D structure

PDB id

9MKK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of arbekacin bound Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

9MKK|1|a|A|1535, 9MKK|1|a|C|1536

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9MKK_063 not in the Motif Atlas

Geometric match to HL_5ML7_002

Geometric discrepancy: 0.3014

The information below is about HL_5ML7_002

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.3

Basepair signature

cWW-tSW-F

Number of instances in this motif group

62

Unit IDs

9MKK|1|a|C|1533
9MKK|1|a|U|1534
9MKK|1|a|A|1535
9MKK|1|a|C|1536
9MKK|1|a|G|1537
9MKK|1|a|G|1538

Current chains

Chain a

23S rRNA

Nearby chains