HL_9MKK_065

3D structure

PDB id

9MKK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of arbekacin bound Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AGAGAAU

Length

7 nucleotides

Bulged bases

9MKK|1|a|A|1634

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9MKK_065 not in the Motif Atlas

Geometric match to HL_7WKP_001

Geometric discrepancy: 0.1146

The information below is about HL_7WKP_001

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

9MKK|1|a|A|1630
9MKK|1|a|G|1631
9MKK|1|a|A|1632
9MKK|1|a|G|1633
9MKK|1|a|A|1634
9MKK|1|a|A|1635
9MKK|1|a|U|1636

Current chains

Chain a

23S rRNA

Nearby chains