HL_9MNC_024

3D structure

PDB id

9MNC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome bound to small molecule SW393071

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GCGAAAGAC

Length

9 nucleotides

Bulged bases

9MNC|1|L5|A|1630, 9MNC|1|L5|G|1633

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MNC|1|L5|G|1627
9MNC|1|L5|C|1628
9MNC|1|L5|G|1629
9MNC|1|L5|A|1630
9MNC|1|L5|A|1631
9MNC|1|L5|A|1632
9MNC|1|L5|G|1633
9MNC|1|L5|A|1634
9MNC|1|L5|C|1635

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LD

Large ribosomal subunit protein uL2

Chain LN

Large ribosomal subunit protein eL15

Chain LP

Large ribosomal subunit protein eL37