HL_9MNC_026

3D structure

PDB id

9MNC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome bound to small molecule SW393071

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CUGGCGUG

Length

8 nucleotides

Bulged bases

9MNC|1|L5|G|1821

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MNC|1|L5|C|1816
9MNC|1|L5|U|1817
9MNC|1|L5|G|1818
9MNC|1|L5|G|1819
9MNC|1|L5|C|1820
9MNC|1|L5|G|1821
9MNC|1|L5|U|1822
9MNC|1|L5|G|1823

Current chains

Chain L5

28S rRNA

Nearby chains

Chain L8

Large ribosomal subunit protein uL18

Chain LT

Large ribosomal subunit protein eL21

Chain Lb

Large ribosomal subunit protein eL29