HL_9MNC_055

3D structure

PDB id

9MNC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome bound to small molecule SW393071

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

UUCAG(OMU)ACG

Length

9 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MNC|1|L5|U|4301
9MNC|1|L5|U|4302
9MNC|1|L5|C|4303
9MNC|1|L5|A|4304
9MNC|1|L5|G|4305
9MNC|1|L5|OMU|4306
9MNC|1|L5|A|4307
9MNC|1|L5|C|4308
9MNC|1|L5|G|4309

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LT

Large ribosomal subunit protein eL21

Chain La

Large ribosomal subunit protein uL15

Chain Le

Large ribosomal subunit protein eL42

Chain Lj

Large ribosomal subunit protein eL18