HL_9MNC_084
3D structure
- PDB id
- 9MNC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome bound to small molecule SW393071
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.33 Å
Loop
- Sequence
- UG(PSU)(PSU)CAAAG
- Length
- 9 nucleotides
- Bulged bases
- 9MNC|1|S2|G|821
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9MNC_084 not in the Motif Atlas
- Homologous match to HL_9PN5_092
- Geometric discrepancy: 0.1043
- The information below is about HL_9PN5_092
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_11974.5
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 21
Unit IDs
9MNC|1|S2|U|820
9MNC|1|S2|G|821
9MNC|1|S2|PSU|822
9MNC|1|S2|PSU|823
9MNC|1|S2|C|824
9MNC|1|S2|A|825
9MNC|1|S2|A|826
9MNC|1|S2|A|827
9MNC|1|S2|G|828
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SE
- Small ribosomal subunit protein eS4, X isoform
- Chain SJ
- Small ribosomal subunit protein uS4
- Chain SY
- Isoform 3 of Small ribosomal subunit protein eS24
Coloring options: