HL_9MOR_006

3D structure

PDB id

9MOR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Damaged 70S ribosome with PrfH bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

9MOR|1|1|A|196, 9MOR|1|1|A|199

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9MOR_006 not in the Motif Atlas

Homologous match to HL_4WF9_006

Geometric discrepancy: 0.1184

The information below is about HL_4WF9_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

9MOR|1|1|G|194
9MOR|1|1|A|195
9MOR|1|1|A|196
9MOR|1|1|A|197
9MOR|1|1|C|198
9MOR|1|1|A|199
9MOR|1|1|U|200
9MOR|1|1|C|201

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain L

Large ribosomal subunit protein uL15

Chain X

50S ribosomal protein L28