HL_9MOR_007

3D structure

PDB id

9MOR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Damaged 70S ribosome with PrfH bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CAACCG

Length

6 nucleotides

Bulged bases

9MOR|1|1|C|228

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9MOR_007 not in the Motif Atlas

Homologous match to HL_5J7L_140

Geometric discrepancy: 0.5282

The information below is about HL_5J7L_140

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_62934.1

Basepair signature

cWW-tSH-F

Number of instances in this motif group

2

Unit IDs

9MOR|1|1|C|225
9MOR|1|1|A|226
9MOR|1|1|A|227
9MOR|1|1|C|228
9MOR|1|1|C|229
9MOR|1|1|G|230

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain L

Large ribosomal subunit protein uL15