3D structure

PDB id
9MOR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Damaged 70S ribosome with PrfH bound
Experimental method
ELECTRON MICROSCOPY
Resolution
2.65 Å

Loop

Sequence
GAAACAAC
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_9MOR_027 not in the Motif Atlas
Homologous match to HL_9DFE_026
Geometric discrepancy: 0.4419
The information below is about HL_9DFE_026
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_47171.1
Basepair signature
cWW-F-F-F-F-F-F
Number of instances in this motif group
10

Unit IDs

9MOR|1|1|G|978
9MOR|1|1|A|979
9MOR|1|1|A|980
9MOR|1|1|A|981
9MOR|1|1|C|982
9MOR|1|1|A|983
9MOR|1|1|A|984
9MOR|1|1|C|985

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain 4
5S ribosomal RNA; 5S rRNA
Chain Q
50S ribosomal protein L20
Chain R
Large ribosomal subunit protein bL21
Chain Z
50S ribosomal protein L30

Coloring options:


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