HL_9MR4_087

3D structure

PDB id

9MR4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

NAC: Ribosome nascent chain complex(Oxa1L)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

9MR4|1|K|G|385

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9MR4_087 not in the Motif Atlas

Geometric match to HL_8GLP_091

Geometric discrepancy: 0.1117

The information below is about HL_8GLP_091

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50525.1

Basepair signature

cWW-cWW-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

9MR4|1|K|G|377
9MR4|1|K|U|378
9MR4|1|K|C|379
9MR4|1|K|G|380
9MR4|1|K|C|381
9MR4|1|K|C|382
9MR4|1|K|G|383
9MR4|1|K|U|384
9MR4|1|K|G|385
9MR4|1|K|C|386
9MR4|1|K|C|387

Current chains

Chain K

18S rRNA

Nearby chains

Chain CC

40S ribosomal protein S8

Chain EE

Ribosomal protein S11