HL_9MR4_090

3D structure

PDB id

9MR4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

NAC: Ribosome nascent chain complex(Oxa1L)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CCAAGG

Length

6 nucleotides

Bulged bases

9MR4|1|K|A|464

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9MR4_090 not in the Motif Atlas

Homologous match to HL_9PN5_087

Geometric discrepancy: 0.2967

The information below is about HL_9PN5_087

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61337.7

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

9MR4|1|K|C|462
9MR4|1|K|C|463
9MR4|1|K|A|464
9MR4|1|K|A|465
9MR4|1|K|G|466
9MR4|1|K|G|467

Current chains

Chain K

18S rRNA

Nearby chains

Chain V

Ribosomal protein L23

Chain z

40S ribosomal protein S6