HL_9MR4_095

3D structure

PDB id

9MR4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

NAC: Ribosome nascent chain complex(Oxa1L)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

UGUUCAAAG

Length

9 nucleotides

Bulged bases

9MR4|1|K|G|821, 9MR4|1|K|U|823

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9MR4_095 not in the Motif Atlas

Homologous match to HL_9PN5_092

Geometric discrepancy: 0.1377

The information below is about HL_9PN5_092

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11974.5

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

21

Unit IDs

9MR4|1|K|U|820
9MR4|1|K|G|821
9MR4|1|K|U|822
9MR4|1|K|U|823
9MR4|1|K|C|824
9MR4|1|K|A|825
9MR4|1|K|A|826
9MR4|1|K|A|827
9MR4|1|K|G|828

Current chains

Chain K

18S rRNA

Nearby chains

Chain DD

Ribosomal protein S9 (Predicted)

Chain NN

Small ribosomal subunit protein eS24

Chain x

40S ribosomal protein S4