HL_9MTQ_141

3D structure

PDB id

9MTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGD-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

UGAUGAG

Length

7 nucleotides

Bulged bases

9MTQ|1|2A|U|1739

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9MTQ_141 not in the Motif Atlas

Geometric match to HL_9DFE_041

Geometric discrepancy: 0.1289

The information below is about HL_9DFE_041

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

9MTQ|1|2A|U|1720
9MTQ|1|2A|G|1721
9MTQ|1|2A|A|1722
9MTQ|1|2A|U|1739
9MTQ|1|2A|G|1740
9MTQ|1|2A|A|1741
9MTQ|1|2A|G|1742

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains